Function reference

buildScoreCache()
buildScoreCache.bayes()
forLoopContentBayes()
forLoopContent()
buildScoreCache.mle()
 Build a cache of goodness of fit metrics for each node in a DAG, possibly subject to userdefined restrictions

build.control()
 Control the iterations in
buildScoreCache

mostProbable()
 Find most probable DAG structure

searchHeuristic()
 A family of heuristic algorithms that aims at finding high scoring directed acyclic graphs

searchHillClimber()
 Find high scoring directed acyclic graphs using heuristic search.

fitAbn()
fitAbn.bayes()
fitAbn.mle()
regressionLoop()
 Fit an additive Bayesian network model

fit.control()
 Control the iterations in
fitAbn

simulateAbn()
 Simulate data from a fitted additive Bayesian network.

simulateDag()
 Simulate a DAG with with arbitrary arcs density

plotAbn()
 Plot an ABN graphic

toGraphviz()
 Convert a DAG into graphviz format

linkStrength()
 Returns the strengths of the edge connections in a Bayesian Network learned from observational data

mb()
 Compute the Markov blanket

compareDag()
 Compare two DAGs or EGs

compareEG()
 Compare two DAGs or EGs

discretization()
 Discretization of a Possibly Continuous Data Frame of Random Variables based on their distribution

essentialGraph()
 Construct the essential graph

infoDag()
 Compute standard information for a DAG.

expit()
 expit of proportions

logit()
 Logit of proportions

odds()
 Probability to odds

or()
 Odds Ratio from a matrix

logLik(<abnFit>)
 Print logLik of objects of class
abnFit

miData()
 Empirical Estimation of the Entropy from a Table of Counts

skewness()
 Computes skewness of a distribution

scoreContribution()
 Compute the score's contribution in a network of each observation.

summary(<abnDag>)
 Prints summary statistics from an object of class
abnDag

summary(<abnFit>)
 Print summary of objects of class
abnFit

summary(<abnMostprobable>)
 Print summary of objects of class
abnMostprobable

AIC(<abnFit>)
 Print AIC of objects of class
abnFit

BIC(<abnFit>)
 Print BIC of objects of class
abnFit